SAMSAM menu

Most SAMSAM Menu programs require X-11 graphics which might exclude the computer at home with relatively slow modem connections. Use the "speed test" to check what you can expect on your local setup. If you cannot use X graphics or if your connection is too slow, try a telnet connection and work in text mode ('vt100') only or use SAMSAM basic or SAMSAM plus.

SAMSAM menu gives access to:

a reaction database with organic reactions (an ISIS subset)
an organic synthesis planning program (APSO, the student version of LHASA)
a 3D structure modelling program (SYBYL)
3D molecular structure databases of (in)organic molecules and proteins
a quantum chemical calculation program (MOPAC) and
the program MOLDEN to visualize molecular structures
database searching programs to search protein and nucleic acid sequence databases with your own sequence (BLAST and FASTA)
a query & retrieval program to search in all kinds of protein & nucleic acid databases (SRS)
an alignment program, to align multiple protein or nucleic acid sequences (ClustalW)
Short overview of the SAMSAM Menu programs

With these tools you can reconstruct all the examples as presented in SAMSAM Basic and SAMSAM PLUS by yourself, and of course much more. You may use the tutorials for instruction. To use SAMSAM Menu registration is required. Fill out and submit the registration form if you did not do so yet.

Enter SAMSAM menu

samsam@kncv.nl